2P5R
Crystal structure of the poplar glutathione peroxidase 5 in the oxidized form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM30A |
Synchrotron site | ESRF |
Beamline | BM30A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-12-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.80630 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 71.580, 71.580, 117.820 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 2.450 |
R-factor | 0.218 |
Rwork | 0.211 |
R-free | 0.28000 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.300 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.490 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.062 | 0.335 |
Number of reflections | 13374 | |
<I/σ(I)> | 6.2 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 7.6 | 7.79 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 8.5 | 293 | 25 % PEG 4000, 0.1 M Tris-HCl, 0.2 M calcium chloride, pH 8.5, Microbatch, temperature 293K |