2P3C
Crystal Structure of the subtype F wild type HIV protease complexed with TL-3 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | MAR CCD 165 mm |
Spacegroup name | P 61 |
Unit cell lengths | 61.425, 61.425, 80.892 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.270 - 2.100 |
R-factor | 0.201 |
Rwork | 0.194 |
R-free | 0.26500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Crystal Structure of the multi-drug resistant mutant subtype B HIV protease complexed with TL-3 inhibitor |
RMSD bond length | 0.013 |
RMSD bond angle | 1.593 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0003) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.225 | 32.210 | 2.210 |
High resolution limit [Å] | 2.100 | 6.640 | 2.100 |
Rmerge | 0.046 | 0.026 | 0.318 |
Total number of observations | 800 | 3638 | |
Number of reflections | 10162 | ||
<I/σ(I)> | 10.8 | 16.9 | 2.1 |
Completeness [%] | 99.7 | 94.2 | 99.8 |
Redundancy | 2.5 | 2.6 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 291 | 0.8M ammonium sulfate, 0.1M sodium cacodylate. The crystals nucleated at 277K and were transfered to 291K for further growth. The protein to well proportion was 2:1, pH 6.2, VAPOR DIFFUSION, HANGING DROP |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 291 | 0.8M ammonium sulfate, 0.1M sodium cacodylate. The crystals nucleated at 277K and were transfered to 291K for further growth. The protein to well proportion was 2:1, pH 6.2, VAPOR DIFFUSION, HANGING DROP |