2OT4
Structure of a hexameric multiheme c nitrite reductase from the extremophile bacterium Thiolkalivibrio nitratireducens
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE BW7A |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | BW7A |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.96, 1.7375 |
Spacegroup name | P 21 3 |
Unit cell lengths | 193.917, 193.917, 193.917 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.040 - 1.500 |
R-factor | 0.127 |
Rwork | 0.126 |
R-free | 0.14100 |
Structure solution method | SAD |
RMSD bond length | 0.019 |
RMSD bond angle | 1.575 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELXS |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.520 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.036 | 0.476 |
Number of reflections | 373791 | |
<I/σ(I)> | 17.1 | |
Completeness [%] | 97.4 | 98.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 278 | The drop contained 5mkl of enzyme solution (14.5 mg/ml) in 0.005 M Tris-borat buffer (pH 8.7) and 5 mkl reservoir solution. The reservoir solution contained 26.3% MPD, 0.175 M ammonium acetate in 0.09 M sodium citrate buffer (pH 5.6), VAPOR DIFFUSION, HANGING DROP, temperature 278K |