2OQM
Crystal structure of a dinb family member protein (sden_0562) from shewanella denitrificans at 1.83 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-01-18 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.91837, 0.97908, 0.97874 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.437, 71.722, 93.489 |
Unit cell angles | 90.00, 107.35, 90.00 |
Refinement procedure
Resolution | 45.220 - 1.830 |
R-factor | 0.159 |
Rwork | 0.157 |
R-free | 0.19600 |
Structure solution method | MAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.492 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.220 | 1.900 | |
High resolution limit [Å] | 1.830 | 3.130 | 1.830 |
Rmerge | 0.065 | 0.042 | 0.467 |
Number of reflections | 68483 | ||
<I/σ(I)> | 8.61 | 16.7 | 2.2 |
Completeness [%] | 92.9 | 97.6 | 83.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | NANODROP, 0.271M Ammonium formate, 18.5% Polyethylene glycol 3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K |