2OMK
Structure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 5ID-B |
Synchrotron site | APS |
Beamline | 5ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-04-17 |
Detector | MARRESEARCH |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.309, 66.084, 57.552 |
Unit cell angles | 90.00, 99.90, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.800 |
R-factor | 0.1664 |
Rwork | 0.165 |
R-free | 0.20025 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.094 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.071 | 0.300 |
Number of reflections | 36873 | |
<I/σ(I)> | 23.7 | 5.5 |
Completeness [%] | 94.8 | 67.1 |
Redundancy | 6.9 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 295 | 0.05 M Potassium phosphate monobasic, 20 % w/v Polyethylene glycol 8000, pH 4.7, VAPOR DIFFUSION, SITTING DROP, temperature 295K |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 295 | 0.05 M Potassium phosphate monobasic, 20 % w/v Polyethylene glycol 8000, pH 4.7, VAPOR DIFFUSION, SITTING DROP, temperature 295K |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 295 | 0.05 M Potassium phosphate monobasic, 20 % w/v Polyethylene glycol 8000, pH 4.7, VAPOR DIFFUSION, SITTING DROP, temperature 295K |