Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2O1X

1-deoxy-D-xylulose 5-phosphate synthase (DXS) from Deinococcus radiodurans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X4C
Synchrotron siteNSLS
BeamlineX4C
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2006-04-25
DetectorMAR scanner 180 mm plate
Spacegroup nameP 1 21 1
Unit cell lengths78.261, 154.062, 124.881
Unit cell angles90.00, 98.91, 90.00
Refinement procedure
Resolution30.000 - 2.900
R-factor0.212
Rwork0.209
R-free0.27200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.382
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0003)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0003.000
High resolution limit [Å]2.9002.900
Rmerge0.1140.420
Number of reflections64098
<I/σ(I)>13.43.3
Completeness [%]97.496.6
Redundancy3.53.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5298100 mM Tris, pH7.5, 200 mM ammonium acetate, 150 mM NaCl, and 20% (w/v) PEG 6000 or PEG 8000, VAPOR DIFFUSION, SITTING DROP, temperature 298K

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon