Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2JAR

Crystal structure of D12N variant of mouse cytosolic 5'(3')- deoxyribonucleotidase (cdN) in complex with deoxyuridine 5'- monophosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]100
Detector technologyCCD
Collection date2006-02-25
DetectorADSC CCD
Spacegroup nameP 62
Unit cell lengths75.309, 75.309, 85.174
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.000 - 1.940
R-factor0.158
Rwork0.156
R-free0.20100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.014
RMSD bond angle1.423
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]65.2302.060
High resolution limit [Å]1.9501.950
Rmerge0.1000.340
Number of reflections20062
<I/σ(I)>195.8
Completeness [%]100.0100
Redundancy10.710.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52790.2 M MAGNESIUM CHLORIDE, 0.1 M BIS-TRIS PH 5.5, 23-25% PEG3350 AT 6 DEGREES CELSIUS

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon