2HOD
Crystal Structure of Fragment D from Human Fibrinogen Complexed with Gly-hydroxyPro-Arg-Pro-amide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-03-04 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.95 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 81.647, 47.069, 431.460 |
Unit cell angles | 90.00, 90.06, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.900 |
R-factor | 0.2384 |
Rwork | 0.268 |
R-free | 0.34710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fzg |
RMSD bond length | 0.009 |
RMSD bond angle | 1.606 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 71011 | |
Completeness [%] | 85.3 | 42 |
Redundancy | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | equal volumes of 10 mg/ml fragment D, 5 mM Gly-hydroxyPro-Arg-Pro-amide, 50 mM Tris, pH 7.0 and 16% PEG 3350, 50 mM Tris pH 8.0 mM 20 mM CaCl2, 2 mM sodium azide., pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K |