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2HBK

Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain; Protein in complex with Mn

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyCCD
Collection date2005-10-27
DetectorMARRESEARCH
Wavelength(s)1.50
Spacegroup nameP 31 2 1
Unit cell lengths110.680, 110.680, 79.729
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution36.220 - 2.250
R-factor0.228
Rwork0.222
R-free0.27900
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2hbj
RMSD bond length0.007
RMSD bond angle1.271
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.2202.330
High resolution limit [Å]2.2502.250
Rmerge0.0400.341
Number of reflections270562637
<I/σ(I)>19.74.9
Completeness [%]99.798.8
Redundancy5.64.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP727712-14% PEG 20000, 0.1M Mes or Hepes, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K

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