2H1S
Crystal Structure of a Glyoxylate/Hydroxypyruvate reductase from Homo sapiens
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-04-19 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97928 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 75.996, 66.436, 148.774 |
Unit cell angles | 90.00, 98.59, 90.00 |
Refinement procedure
Resolution | 49.326 - 2.450 |
Rwork | 0.207 |
R-free | 0.26430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gdh 1WWK as a basis of 2-member ensemble |
RMSD bond length | 0.015 |
RMSD bond angle | 1.590 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.326 | 80.000 | 2.510 |
High resolution limit [Å] | 2.450 | 6.040 | 2.450 |
Rmerge | 0.157 | 0.098 | 0.504 |
Number of reflections | 50144 | ||
<I/σ(I)> | 7.087 | 2.261 | |
Completeness [%] | 93.3 | 99.6 | 80.3 |
Redundancy | 6.2 | 7.2 | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | PROTEIN SOLUTION (10 MG/ML PROTEIN, 0.050 M SODIUM CHLORIDE, 0.0003 M TCEP, 0.005 MES PH 6.0) MIXED IN A 1:1 RATIO WITH THE WELL SOLUTION (12% PEG 3350, 0.10 M MOPS PH 7). Crystal was cryo-protected with 15% PEG 3350, 0.10 M PIPES PH 6.5 and a final concentration of 25% Ethylene glycol, vapor diffusion, hanging drop, temperature 293K |