2H0D
Structure of a Bmi-1-Ring1B Polycomb group ubiquitin ligase complex
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-07-16 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.2821, 1.2826, 1.25 |
Spacegroup name | P 63 |
Unit cell lengths | 120.514, 120.514, 27.209 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 104.260 - 2.500 |
R-factor | 0.21137 |
Rwork | 0.210 |
R-free | 0.24418 |
Structure solution method | MAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.319 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE (2.08) |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.066 | 0.258 |
Number of reflections | 8143 | |
<I/σ(I)> | 15.9 | |
Completeness [%] | 99.1 | 100 |
Redundancy | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 290 | 20 mM Tris, 500 mM NaCl, 1 mM EDTA, 1.5 mM DTT, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 290 | 20 mM Tris, 500 mM NaCl, 1 mM EDTA, 1.5 mM DTT, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 290 | 20 mM Tris, 500 mM NaCl, 1 mM EDTA, 1.5 mM DTT, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 290K |