Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2GV9

Crystal structure of the Herpes Simplex virus type 1 DNA polymerase

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyCCD
Collection date2002-11-01
DetectorADSC QUANTUM 315
Wavelength(s)1.0, 0.9794, 0.9504
Spacegroup nameP 21 21 21
Unit cell lengths103.917, 125.550, 220.577
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.300 - 2.680
R-factor0.2248
Rwork0.222
R-free0.28057
Structure solution methodMAD
RMSD bond length0.018
RMSD bond angle1.815
Data scaling softwareHKL-2000
Phasing softwareSHELXS
Refinement softwareREFMAC (5.2.0003)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.3002.800
High resolution limit [Å]2.6752.675
Rmerge0.0710.849
Number of reflections81295
<I/σ(I)>30.22.4
Completeness [%]100.0100
Redundancy9.18.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7100mM HEPES, 50mM ammonium sulphate, 5mM DTT, 100mM guanidine-HCl, 4% PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon