2GB5
Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-10-18 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9802, 1.0000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 99.287, 103.553, 57.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.610 - 2.300 |
Rwork | 0.198 |
R-free | 0.25200 |
Structure solution method | MAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.225 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.629 | 49.630 | 2.360 |
High resolution limit [Å] | 2.300 | 10.290 | 2.300 |
Rmerge | 0.076 | 0.043 | 0.384 |
Total number of observations | 1047 | 4870 | |
Number of reflections | 26695 | 343 | 1773 |
<I/σ(I)> | 5.7 | 14.8 | 2 |
Completeness [%] | 99.1 | 96.5 | 91.6 |
Redundancy | 3.4 | 3.1 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP, NANODROP | 277 | 9.975% PEG MME 5000, 0.05M Acetic Acid, 0.052M Citrate_Na3, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K |