2GB5
Crystal structure of NADH pyrophosphatase (EC 3.6.1.22) (1790429) from Escherichia coli K12 at 2.30 A resolution
Experimental procedure
| Experimental method | MAD |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.2 |
| Synchrotron site | ALS |
| Beamline | 8.2.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2003-10-18 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9802, 1.0000 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 99.287, 103.553, 57.270 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.610 - 2.300 |
| Rwork | 0.198 |
| R-free | 0.25200 |
| Structure solution method | MAD |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.225 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | SOLVE |
| Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 49.629 | 49.630 | 2.360 |
| High resolution limit [Å] | 2.300 | 10.290 | 2.300 |
| Rmerge | 0.076 | 0.043 | 0.384 |
| Total number of observations | 1047 | 4870 | |
| Number of reflections | 26695 | 343 | 1773 |
| <I/σ(I)> | 5.7 | 14.8 | 2 |
| Completeness [%] | 99.1 | 96.5 | 91.6 |
| Redundancy | 3.4 | 3.1 | 2.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP, NANODROP | 277 | 9.975% PEG MME 5000, 0.05M Acetic Acid, 0.052M Citrate_Na3, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K |






