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2FPV

Dual binding mode of a novel series of DHODH inhibitors

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMPG/DESY, HAMBURG BEAMLINE BW6
Synchrotron siteMPG/DESY, HAMBURG
BeamlineBW6
Temperature [K]100
Detector technologyCCD
Collection date2003-11-24
DetectorMARRESEARCH
Wavelength(s)1.05
Spacegroup nameP 32 2 1
Unit cell lengths90.751, 90.751, 122.775
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.400 - 1.800
Rwork0.195
R-free0.20500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1D3G.pdb
RMSD bond length0.005
RMSD bond angle1.200
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0001.950
High resolution limit [Å]1.8001.800
Rmerge0.0600.300
Number of reflections57548
<I/σ(I)>276
Completeness [%]99.9100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.7293Drops were formed by mixing equal amounts of 20 mg/ml protein in 50 mM HEPES pH 7.7, 400 mM NaCl, 30% glycerol, 1 mM EDTA and 10 mM N,N-dimethylundecylamin-N-oxide (C11DAO) with a precipitant solution of 0.1 M acetate pH 4.6 5.0, 40 mM C11DAO, 20.8 mM N,N-dimethyldecylamine-N-oxide (DDAO), 2 mM dihydroorotate (DHO), 1.8 2.4 M ammonium sulfate, 1 mM compound. The hanging drops were incubated against 0.5 mL reservoir of 0.1 M acetate pH 4.8, 2.4 2.6 M ammonium sulfate and 30% glycerol. , VAPOR DIFFUSION, HANGING DROP, temperature 293K

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