Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2F6E

Clostridium difficile Toxin A C-terminal fragment 1 (TcdA-f1)

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyCCD
Collection date2004-09-15
DetectorADSC QUANTUM 4
Wavelength(s)0.979571,0.979741,1.019867
Spacegroup nameP 41 21 2
Unit cell lengths42.050, 42.050, 132.110
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.160 - 1.850
R-factor0.16191
Rwork0.160
R-free0.20500
Structure solution methodMAD
RMSD bond length0.007
RMSD bond angle0.996
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.1601.920
High resolution limit [Å]1.8501.850
Rmerge0.0570.187
Number of reflections10716
<I/σ(I)>21.47.4
Completeness [%]99.395.7
Redundancy6.46.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.5295250 mM ammonium tartrate, 100 mM sodium acetate, 20% glycerol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon