2DLA
Primase large subunit amino terminal domain from Pyrococcus horikoshii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-07-07 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1.0 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 89.250, 89.250, 252.674 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.900 |
Rwork | 0.248 |
R-free | 0.30940 |
Structure solution method | MAD, MOLECULAR REPLACEMENT |
Starting model (for MR) | seleno-methionie derivative structure(This is not deposited to PDB) |
RMSD bond length | 0.008 |
RMSD bond angle | 1.364 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MLPHARE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.930 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.044 | 0.218 |
Number of reflections | 23431 | |
<I/σ(I)> | 17 | 7.3 |
Completeness [%] | 99.2 | 100 |
Redundancy | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1M Ammonium Sulfate, 50mM Magnesium Sulfate, 25mM Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1M Ammonium Sulfate, 50mM Magnesium Sulfate, 25mM Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1M Ammonium Sulfate, 50mM Magnesium Sulfate, 25mM Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |