2DDX
Crystal structure of beta-1,3-xylanase from Vibrio sp. AX-4
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-12-21 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.974, 0.978, 0.960 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.873, 75.654, 82.119 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.850 - 0.860 |
R-factor | 0.13988 |
Rwork | 0.139 |
R-free | 0.14772 |
Structure solution method | MAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.185 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 0.890 |
High resolution limit [Å] | 0.860 | 0.860 |
Number of reflections | 264110 | |
<I/σ(I)> | 11.4 | |
Completeness [%] | 96.9 | 74.7 |
Redundancy | 7 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 1M sodium citrate, 0.1M CHES, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 1M sodium citrate, 0.1M CHES, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 1M sodium citrate, 0.1M CHES, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |