2D5W
The crystal structure of oligopeptide binding protein from Thermus thermophilus HB8 complexed with pentapeptide
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44B2 |
Synchrotron site | SPring-8 |
Beamline | BL44B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-09-30 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.900, 0.9788, 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 100.600, 109.200, 114.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 - 1.300 |
Rwork | 0.186 |
R-free | 0.19600 |
Structure solution method | MAD |
RMSD bond length | 0.005 |
RMSD bond angle | 1.303 |
Data reduction software | TRUNCATE |
Data scaling software | CCP4 ((TRUNCATE)) |
Phasing software | SOLVE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.290 |
High resolution limit [Å] | 1.250 | 1.250 |
Number of reflections | 346050 | |
<I/σ(I)> | 31 | 6.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 10.1 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 20% PEG 3350, 0.15M lithium nitrate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 20% PEG 3350, 0.15M lithium nitrate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 20% PEG 3350, 0.15M lithium nitrate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |