2BDL
Cathepsin K complexed with a pyrrolidine ketoamide-based inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-10-27 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.060, 50.338, 105.891 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.930 - 2.000 |
R-factor | 0.1959 |
Rwork | 0.193 |
R-free | 0.24060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1atk |
RMSD bond length | 0.007 |
RMSD bond angle | 0.984 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.930 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.066 | 0.257 |
Number of reflections | 11497 | |
<I/σ(I)> | 14.5 | 2.5 |
Completeness [%] | 85.0 | 75.1 |
Redundancy | 5.7 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | 0.2 M ammonium sulfate, 30% PEG8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |