Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2B1C

5'-D(*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3' Zif268 binding site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12C
Synchrotron siteNSLS
BeamlineX12C
Temperature [K]100
Detector technologyCCD
Collection date2001-03-13
DetectorADSC QUANTUM 4
Spacegroup nameP 61 2 2
Unit cell lengths38.482, 38.482, 78.225
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.700 - 2.200
R-factor0.234
Rwork0.234
R-free0.28600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)401d
RMSD bond length0.010
RMSD bond angle1.400
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.280
High resolution limit [Å]2.2002.200
Rmerge0.0760.189
Number of reflections1752
<I/σ(I)>16.34.9
Completeness [%]85.536.2
Redundancy6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
15.5295MPD, sodium cacodylate, cobalt hexamine, sodium chloride, potassium chloride, vapor diffusion, hanging drop, temperature 295K, pH 5.50
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111MPD
1012sodium chloride
1112potassium chloride
1212H2O
211sodium cacodylate
311cobalt hexamine
411sodium chloride
511potassium chloride
611H2O
712MPD
812sodium cacodylate
912cobalt hexamine

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon