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2Z3H

Crystal structure of blasticidin S deaminase (BSD) complexed with deaminohydroxy blasticidin S

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL45XU
Synchrotron siteSPring-8
BeamlineBL45XU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Spacegroup nameP 21 21 21
Unit cell lengths54.300, 69.275, 146.535
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.500
R-factor0.173
Rwork0.172
R-free0.18500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1wn5
RMSD bond length0.008
RMSD bond angle1.229
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.500
Rmerge0.091
Number of reflections89147
Completeness [%]99.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729320% PEG8000, 0.1M SODIUM CACODYLATE, 50MM MAGNESIUM CHLORIDE, pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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