Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2YGY

Structure of wild type E. coli N-acetylneuraminic acid lyase in space group P21 crystal form II

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyCCD
Collection date2009-04-16
DetectorADSC CCD
Spacegroup nameP 1 21 1
Unit cell lengths84.260, 95.870, 91.380
Unit cell angles90.00, 115.33, 90.00
Refinement procedure
Resolution82.590 - 1.900
R-factor0.196
Rwork0.194
R-free0.22400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wnn
RMSD bond length0.009
RMSD bond angle1.165
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.6.0105)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.9402.000
High resolution limit [Å]1.9001.900
Rmerge0.1000.320
Number of reflections102699
<I/σ(I)>73.7
Completeness [%]99.499.5
Redundancy3.13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
18100MM TRIS-HCL PH 8.0, 200MM NACL, 18% PEG3350

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon