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2YGS

CARD DOMAIN FROM APAF-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Spacegroup nameC 1 2 1
Unit cell lengths56.700, 36.000, 47.900
Unit cell angles90.00, 118.20, 90.00
Refinement procedure
Resolution8.000 - 1.600
Rwork0.198
R-free0.23600
Structure solution methodMIR
RMSD bond length0.006
RMSD bond angle1.275
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.8)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.660
High resolution limit [Å]1.6001.600
Rmerge0.057

*

0.120

*

Total number of observations92435

*

Number of reflections11042

*

Completeness [%]96.8

*

88.8

*

Redundancy11
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

4.6

*

22

*

pH 6.0
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21reservoiracetate100 (mM)
31reservoirPEG400024-28 (%(w/w))
41reservoirammonium acetate200 (mM)
51reservoirdithiothreitol10 (mM)

219869

PDB entries from 2024-05-15

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