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2YA6

Crystal structure of Streptococcus pneumoniae NanA (TIGR4) in complex with DANA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
DetectorRAYONICS
Spacegroup nameC 1 2 1
Unit cell lengths164.857, 48.835, 125.383
Unit cell angles90.00, 104.13, 90.00
Refinement procedure
Resolution24.950 - 2.000
R-factor0.1966
Rwork0.196
R-free0.23774
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.263
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0600.460
Number of reflections63554
<I/σ(I)>22.91.86
Completeness [%]97.083.6
Redundancy3.82.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
120% PEG 3350, 200 MM KFORMATE, 20 MM TRIS PH 7.5 .

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PDB entries from 2024-05-15

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