2Y6P
Evidence for a Two-Metal-Ion-Mechanism in the Kdo- Cytidylyltransferase KdsB
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-09-14 |
Detector | MARRESEARCH SX-165 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 156.175, 51.175, 107.514 |
Unit cell angles | 90.00, 102.68, 90.00 |
Refinement procedure
Resolution | 29.350 - 2.100 |
R-factor | 0.21369 |
Rwork | 0.211 |
R-free | 0.25792 |
Structure solution method | MIRAS |
Starting model (for MR) | NONE |
RMSD bond length | 0.012 |
RMSD bond angle | 1.375 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | autoSHARP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.360 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.040 | 0.120 |
Number of reflections | 46213 | |
<I/σ(I)> | 16.74 | 6.12 |
Completeness [%] | 94.8 | 88.5 |
Redundancy | 3.75 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | THE DROPS CONTAINED EQUAL AMOUNTS OF KDSB (10 MG/ML IN 20 MM TRIS-HCL, PH 7.5, 100 MM NACL, 5 MM MGCL2, 2 MM 2-MERCAPTOETHANOL, SUPPLEMENTED WITH 1 MM CTP) AND RESERVOIR SOLUTION (0.1 M HEPES PH 7.5, 18.8% ISOPROPANOL, 18.7% PEG 4000). |