Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2Y0P

Crystal structure of the SucA domain of Mycobacterium smegmatis alpha- ketoglutarate decarboxylase in complex with the enamine-ThDP intermediate and acetyl-CoA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]110
Detector technologyCCD
Collection date2010-11-20
DetectorADSC CCD
Spacegroup nameP 1
Unit cell lengths81.062, 81.953, 161.876
Unit cell angles99.26, 97.09, 100.58
Refinement procedure
Resolution35.140 - 2.400
R-factor0.198
Rwork0.197
R-free0.22020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2XT7
RMSD bond length0.008
RMSD bond angle0.970
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareBUSTER (2.9.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.4002.530
High resolution limit [Å]2.4002.400
Rmerge0.1000.560
Number of reflections149496
<I/σ(I)>7.41.9
Completeness [%]95.895.6
Redundancy2.52.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
17.652% MPD, 20 MM SODIUM ACETATE, 5% 1-3-PROPANEDIOL, pH 7.6

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon