2XJE
Crystal structure of the D52N variant of cytosolic 5'-nucleotidase II in complex with uridine 5'-monophosphate and adenosine triphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-02-10 |
Detector | ADSC CCD |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 91.650, 127.610, 130.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.090 - 2.300 |
R-factor | 0.21749 |
Rwork | 0.215 |
R-free | 0.26905 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2jcm |
RMSD bond length | 0.018 |
RMSD bond angle | 1.785 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.400 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.100 | 0.410 |
Number of reflections | 34194 | |
<I/σ(I)> | 13.2 | 3.9 |
Completeness [%] | 99.5 | 100 |
Redundancy | 4.8 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 0.1 M BICINE PH 9, 10% PEG6000 |