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2WBM

Crystal structure of mthSBDS, the homologue of the Shwachman-Bodian- Diamond syndrome protein in the euriarchaeon Methanothermobacter thermautotrophicus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]110
Detector technologyCCD
DetectorMARRESEARCH
Spacegroup nameP 2 2 21
Unit cell lengths68.300, 72.108, 146.829
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.980 - 1.750
R-factor0.191
Rwork0.191
R-free0.21400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1p9q
RMSD bond length0.010
RMSD bond angle1.173
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0074)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.0001.780
High resolution limit [Å]1.7501.750
Rmerge0.0600.590
Number of reflections72559
<I/σ(I)>20.31.7
Completeness [%]98.482.8
Redundancy3.93
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6PROTEIN AT 22.5 MG/ML IN 25 MM TRIS (PH 7.5) AND 0.1 M NACL, WAS CRYSTALLIZED BY THE VAPOUR DIFFUSION METHOD AGAINST A RESERVOIR COMPOSED OF 0.9 M LITHIUM SULPHATE, 0.5 M AMMONIUM SULPHATE AND 0.1 M SODIUM CITRATE (PH 5.6)

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PDB entries from 2024-05-15

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