2VS1
The crystal structure of Pyrococcus abyssi tRNA (uracil-54, C5)- methyltransferase in complex with S-adenosyl-L-homocysteine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC CCD |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 99.529, 100.415, 55.737 |
Unit cell angles | 90.00, 111.61, 90.00 |
Refinement procedure
Resolution | 68.040 - 2.100 |
R-factor | 0.188 |
Rwork | 0.185 |
R-free | 0.25100 |
Structure solution method | MAD |
Starting model (for MR) | NONE |
RMSD bond length | 0.029 |
RMSD bond angle | 2.342 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | autoSHARP |
Refinement software | REFMAC (5.4.0069) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 68.000 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.050 | 0.400 |
Number of reflections | 28990 | |
<I/σ(I)> | 19 | 3 |
Completeness [%] | 97.4 | 96.4 |
Redundancy | 3.6 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 15% PEG 8000, 0.05 M AMMONIUM SULFATE, 0.1 M SODIUM CITRATE PH 5.6 |