2RDE
Crystal structure of VCA0042 complexed with c-di-GMP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X4A |
| Synchrotron site | NSLS |
| Beamline | X4A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2006-09-14 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 0.97933 |
| Spacegroup name | P 1 |
| Unit cell lengths | 47.006, 55.400, 58.044 |
| Unit cell angles | 99.88, 97.09, 106.80 |
Refinement procedure
| Resolution | 20.000 - 1.920 |
| Rwork | 0.195 |
| R-free | 0.20900 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1yln |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.287 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | COMO |
| Refinement software | CNS (1.1) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
| High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
| Rmerge | 0.062 | 0.040 | 0.411 |
| Number of reflections | 42107 | ||
| <I/σ(I)> | 20.6 | ||
| Completeness [%] | 97.8 | 98.8 | 96.6 |
| Redundancy | 3.9 | 3.8 | 3.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 278 | 22% PEG 3350, 220mM Potassium acetate, 100mM Na-MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 278K |
