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2PHU

Pterocarpus angolensis lectin in complex with Man-8D1D3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]293
Detector technologyCCD
DetectorMAR CCD 165 mm
Wavelength(s)0.81
Spacegroup nameP 21 21 21
Unit cell lengths56.696, 83.348, 122.690
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 2.200
Rwork0.174
R-free0.20900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1q8p
RMSD bond length0.006
RMSD bond angle1.560
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.0002.280
High resolution limit [Å]2.2002.200
Rmerge0.0570.365
Number of reflections29897
<I/σ(I)>12.23.93
Completeness [%]99.299
Redundancy4.94.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.6293100 mM Cacodylate pH 6.6, 200 mM CaCl2, 18% (w/v) PEG-6000, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 6.6 , temperature 293 K

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PDB entries from 2024-12-25

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