2PAA
Crystal structure of phosphoglycerate kinase-2 bound to atp and 3pg
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2006-07-06 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 |
Unit cell lengths | 39.854, 64.541, 75.936 |
Unit cell angles | 90.34, 77.20, 85.03 |
Refinement procedure
Resolution | 20.000 - 2.700 |
Rwork | 0.197 |
R-free | 0.27100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vjd |
RMSD bond length | 0.008 |
RMSD bond angle | 1.405 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.810 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.056 | 0.125 |
Number of reflections | 19197 | |
<I/σ(I)> | 14.7 | |
Completeness [%] | 96.9 | 91.7 |
Redundancy | 2.4 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 298 | 30% PEG6000, 0.1 M bicine, 10 mM 3-D-phosphoglycerate, 5 mM ATP, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |