2P51
Crystal structure of the S. pombe Pop2p deadenylation subunit
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-03-10 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.8126 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.370, 54.089, 90.959 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.470 - 1.400 |
R-factor | 0.141 |
Rwork | 0.139 |
R-free | 0.20400 |
Structure solution method | SIRAS |
RMSD bond length | 0.013 |
RMSD bond angle | 0.030 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | SHELX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.470 | 1.420 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.052 | 0.636 |
Number of reflections | 50856 | |
<I/σ(I)> | 26.7 | 1.98 |
Completeness [%] | 99.6 | 99.7 |
Redundancy | 4.7 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 18-24% PEG 8000, 200 mM Mg(CH3COO), 100-200 mM MES, pH 6.5, 0-10% glycerol, 5 mM BME, 1mM NaN3, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 18-24% PEG 8000, 200 mM Mg(CH3COO), 100-200 mM MES, pH 6.5, 0-10% glycerol, 5 mM BME, 1mM NaN3, VAPOR DIFFUSION, SITTING DROP, temperature 293K |