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2NXL

Structure of HIV-1 protease D25N complexed with the rt-rh analogue peptide GLY-ALA-GLU-VAL-PHE*TYR-VAL-ASP-GLY-ALA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]200
Detector technologyIMAGE PLATE
Collection date2005-03-11
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths50.861, 57.500, 61.887
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.110 - 2.000
R-factor0.16307
Rwork0.160
R-free0.21600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1T3R = Crystal structure of HIV- 1 protease complexed with the inhibitor TMC114
RMSD bond length0.007
RMSD bond angle1.455
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2)
Data quality characteristics
 Overall
Low resolution limit [Å]42.110
High resolution limit [Å]2.000
Rmerge0.071
Number of reflections12332
<I/σ(I)>12.5
Completeness [%]95.8
Redundancy5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.2298126 mM sodium phosphate pH 6.2; 63mM sodium citrate; 25-35% Ammonium sulphate, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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