2NCD
NCD (NON-CLARET DISJUNCTIONAL) DIMER FROM D. MELANOGASTER
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU |
| Temperature [K] | 287 |
| Detector technology | IMAGE PLATE |
| Collection date | 1997-10-15 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 123.000, 123.000, 121.100 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 20.000 - 2.500 |
| R-factor | 0.226 |
| Rwork | 0.226 |
| R-free | 0.27000 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | NCD MONOMER |
| RMSD bond length | 0.007 |
| RMSD bond angle | 12.700 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | X-PLOR (3.851) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 25.000 | 2.500 |
| High resolution limit [Å] | 2.500 | 2.300 |
| Rmerge | 0.068 | 0.130 |
| Total number of observations | 190358 * | |
| Number of reflections | 18795 | |
| <I/σ(I)> | 15 | 5 |
| Completeness [%] | 98.6 | 92.6 |
| Redundancy | 10.1 | 5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 4 * | THE MOTHER LIQUOR CONTAINED PROTEIN AT ABOUT 20 MG/ML, 2 MM ADP, 10 MM MGCL2, 100 MM NACL, 700 MM LI2SO4, 1 MM EGTA, AND 1 MM DTT IN 20 MM HEPES, PH 7.5. THE RESERVOIR WAS 1.4 M LI2SO4, 10 MM MGCL2, 1 MM EGTA, 1 MM DTT IN 20 MM HEPES, PH 7.5., VAPOR DIFFUSION, HANGING DROP |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 20 (mg/ml) | |
| 10 | 1 | reservoir | 10 (mM) | ||
| 11 | 1 | reservoir | EGTA | 1 (mM) | |
| 12 | 1 | reservoir | dithiothreitol | 1 (mM) | |
| 13 | 1 | reservoir | HEPES | 20 (mM) | |
| 2 | 1 | drop | ADP | 2 (mM) | |
| 3 | 1 | drop | 10 (mM) | ||
| 4 | 1 | drop | 100 (mM) | ||
| 5 | 1 | drop | 700 (mM) | ||
| 6 | 1 | drop | EGTA | 1 (mM) | |
| 7 | 1 | drop | dithiothreitol | 1 (mM) | |
| 8 | 1 | drop | HEPES | 20 (mM) | |
| 9 | 1 | reservoir | 1.4 (M) |






