2JKV
Structure of human Phosphogluconate Dehydrogenase in complex with NADPH at 2.53A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-06-22 |
Detector | MARRESEARCH |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.643, 204.714, 170.319 |
Unit cell angles | 90.00, 90.65, 90.00 |
Refinement procedure
Resolution | 36.899 - 2.532 |
R-factor | 0.1566 |
Rwork | 0.156 |
R-free | 0.20690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ENTRIES 1PGP 1pgn |
RMSD bond length | 0.008 |
RMSD bond angle | 1.069 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.000 | 2.670 |
High resolution limit [Å] | 2.530 | 2.530 |
Rmerge | 0.140 | 0.570 |
Number of reflections | 128646 | |
<I/σ(I)> | 7.8 | 2.1 |
Completeness [%] | 97.9 | 87.1 |
Redundancy | 3.7 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 0.20M NA2SO4, 20.0% PEG 3350, 10.0% ETGLY |