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2HXS

Crystal Structure of Rab28A GTPase in the Inactive (GDP-3'P-Bound) Form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMAR scanner 345 mm plate
Spacegroup nameP 21 21 21
Unit cell lengths30.510, 56.621, 85.109
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.000 - 1.100
R-factor0.152
Rwork0.149
R-free0.18360
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yzk
RMSD bond length0.024
RMSD bond angle2.184
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.0001.140
High resolution limit [Å]1.1001.100
Rmerge0.0750.367
Number of reflections58782
<I/σ(I)>24.74.25
Completeness [%]98.396.8
Redundancy8.35.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529320% PEG 3360, 100 mM NaCl, 100 mM Potassium Acetate, 5% glycerol, 20 mM HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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