2HBJ
Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE BW7A |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | BW7A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-06-10 |
Detector | MARRESEARCH |
Wavelength(s) | 0.8793, 1.072, 1.071, 1.5218 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 110.135, 110.135, 80.169 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 55.060 - 2.100 |
R-factor | 0.239 |
Rwork | 0.232 |
R-free | 0.29200 |
Structure solution method | MAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.348 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.060 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.058 | 0.503 |
Number of reflections | 33892 | 3087 |
<I/σ(I)> | 12.7 | 2.6 |
Completeness [%] | 98.5 | 91.3 |
Redundancy | 4.9 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 12-14% PEG 20000, 0.1M Mes or Hepes, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 12-14% PEG 20000, 0.1M Mes or Hepes, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K |