2G9V
The crystal structure of glycogen phosphorylase in complex with (3R,4R,5R)-5-hydroxymethylpiperidine-3,4-diol and phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2005-11-03 |
Detector | MARRESEARCH |
Wavelength(s) | 0.8063 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 128.636, 128.636, 116.455 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 90.910 - 2.150 |
R-factor | 0.19557 |
Rwork | 0.193 |
R-free | 0.23501 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1hlf |
RMSD bond length | 0.008 |
RMSD bond angle | 1.088 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.910 | 2.190 |
High resolution limit [Å] | 2.150 | 2.150 |
Number of reflections | 51324 | |
<I/σ(I)> | 9.5 | 3.5 |
Completeness [%] | 95.8 | 99.1 |
Redundancy | 5.5 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | SMALL TUBES | 6.7 | 287 | BES, EDTA, pH 6.7, SMALL TUBES, temperature 287K |