2G76
Crystal structure of human 3-phosphoglycerate dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-02-09 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.99806 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.084, 124.113, 59.502 |
Unit cell angles | 90.00, 100.99, 90.00 |
Refinement procedure
Resolution | 36.200 - 1.700 |
R-factor | 0.1828 |
Rwork | 0.181 |
R-free | 0.21644 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ygy 1psd |
RMSD bond length | 0.012 |
RMSD bond angle | 1.453 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.200 | 1.760 |
High resolution limit [Å] | 1.700 | 1.700 |
Number of reflections | 66626 | |
Completeness [%] | 98.9 | 96.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.1 M MMT, 30 % PEG1k, 5mM NAD+, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |