Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2FYX

Crystal structure of a putative transposase (dr_0177) from deinococcus radiodurans r1 at 1.90 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]100
Detector technologyCCD
Collection date2004-08-25
DetectorADSC QUANTUM 4
Spacegroup nameP 32
Unit cell lengths66.787, 66.787, 81.180
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution27.240 - 1.900
R-factor0.16159
Rwork0.160
R-free0.19100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2f4f chain A
RMSD bond length0.017
RMSD bond angle1.703
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.91528.9201.950
High resolution limit [Å]1.9008.5001.900
Rmerge0.0450.0290.547
Total number of observations15856798
Number of reflections318953582360
<I/σ(I)>9.919.71.3
Completeness [%]100.0
Redundancy3.94.42.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION,SITTING DROP,NANODROP6.52772.0M (NH4)2SO4, 0.2M NaCl, 0.1M Cacodylate pH 6.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon