2F9L
3D structure of inactive human Rab11b GTPase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-08-30 |
Detector | MARRESEARCH |
Wavelength(s) | 1.43 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.790, 52.218, 59.351 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.220 - 1.550 |
R-factor | 0.18813 |
Rwork | 0.186 |
R-free | 0.23755 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1oiv |
RMSD bond length | 0.014 |
RMSD bond angle | 1.720 |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.220 | 1.630 |
High resolution limit [Å] | 1.550 | 1.550 |
Number of reflections | 21134 | |
<I/σ(I)> | 18.4 | 5 |
Completeness [%] | 99.8 | 99.5 |
Redundancy | 6.7 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.8 | 298 | Reservoir solution: 0.1M Tris-HCl pH8.8, 30% PEG 4000 Protein sample: 30 mg/ml Rab11b-GDP, 10mM Tris-HCl pH7.4, 0.1mM Mg Chloride , VAPOR DIFFUSION, HANGING DROP, temperature 298K |