2EFX
The crystal structure of D-amino acid amidase from Ochrobactrum anthropi SV3 complexed with L-phenylalanine amide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-11-11 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.711, 123.396, 115.477 |
Unit cell angles | 90.00, 104.36, 90.00 |
Refinement procedure
Resolution | 19.820 - 2.200 |
R-factor | 0.19035 |
Rwork | 0.187 |
R-free | 0.25613 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | DAA native structure (2DRW) |
RMSD bond length | 0.012 |
RMSD bond angle | 1.356 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.072 | 0.265 |
Number of reflections | 103243 | |
Completeness [%] | 98.1 | 85.6 |
Redundancy | 4.7 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 |