2EBA
Crystal structure of the putative glutaryl-CoA dehydrogenase from thermus thermophilus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 180 |
Detector technology | CCD |
Collection date | 2004-07-02 |
Detector | RIGAKU JUPITER 210 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 |
Unit cell lengths | 75.239, 86.239, 157.418 |
Unit cell angles | 75.92, 81.25, 64.24 |
Refinement procedure
Resolution | 19.960 - 2.210 |
R-factor | 0.26 |
Rwork | 0.260 |
R-free | 0.27500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sir |
RMSD bond length | 0.017 |
RMSD bond angle | 1.800 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CCP4 ((MOLREP)) |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.128 | 0.393 |
Number of reflections | 131981 | |
Completeness [%] | 77.0 | 66.1 |
Redundancy | 2.4 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 0.6M Mg Formate, 0.1M Sodium acetate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K |