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2E93

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with BPH-629

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths45.788, 115.821, 129.997
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.960 - 2.120
Rwork0.167
R-free0.21700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2dh4
RMSD bond length0.020
RMSD bond angle1.700
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.200
High resolution limit [Å]2.1202.120
Rmerge0.0420.209
Number of reflections38573
<I/σ(I)>28.74.1
Completeness [%]96.685.2
Redundancy4.523.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52980.08M CH3COONa, 16% PEG 4000, 6-10% glycerol, 6-10% 1,2-propanediol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K

219869

PDB entries from 2024-05-15

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