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2E8U

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and IPP (P21)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL13B1
Synchrotron siteNSRRC
BeamlineBL13B1
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths82.236, 47.707, 91.831
Unit cell angles90.00, 110.71, 90.00
Refinement procedure
Resolution40.540 - 2.080
Rwork0.198
R-free0.25700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2dh4
RMSD bond length0.020
RMSD bond angle1.800
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.150
High resolution limit [Å]2.0802.080
Rmerge0.0510.255
Number of reflections40504
<I/σ(I)>29.45.9
Completeness [%]99.698.4
Redundancy4.984.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52980.08M CH3COONa, 16% PEG 4000, 6-10% glycerol, 6-10% 1,2-propanediol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K

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PDB entries from 2024-05-15

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