Loading
PDBj
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

24MP

Crystal structure of the GH134 mannanase from Aspergillus nidulans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-30
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.9998
Spacegroup nameC 1 2 1
Unit cell lengths115.857, 50.249, 67.667
Unit cell angles90.00, 105.47, 90.00
Refinement procedure
Resolution28.060 - 1.750
R-factor0.1612
Rwork0.160
R-free0.18660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jts
RMSD bond length0.006
RMSD bond angle0.705
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.810
High resolution limit [Å]1.7501.750
Rpim0.050
Number of reflections371393258
<I/σ(I)>14.7
Completeness [%]97.9
Redundancy3.7
CC(1/2)0.809
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2838 mM 1,6-hexanediol, 8 mM 1-butanol, 8 mM 1,2-propanediol, 8 mM 2-propanol, 8 mM 1,4-butanediol, 8 mM 1,3-propanediol, 40 mM imidazole-MES monohydrate (pH 6.1), 9.6% (v/v) precipitant mix (6.4% ethylene glycol, 3.2% (w/v) PEG 8000), and 3.0% (w/v) 1,5-diaminopentane dihydrochloride.

260626

PDB entries from 2026-10-07

PDB statisticsPDBj update infoContact PDBjnumon