23AL
Crystal Structure of Extradiol Dioxygenase (Edo4) in complex with 2-hydroxybiphenyl
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2025-08-25 |
| Detector | RIGAKU HyPix-6000HE |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 4 21 2 |
| Unit cell lengths | 98.770, 98.770, 152.983 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.240 - 2.800 |
| R-factor | 0.2147 |
| Rwork | 0.213 |
| R-free | 0.24875 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.653 |
| Data reduction software | CrysalisPro |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0431) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 29.240 | 2.900 |
| High resolution limit [Å] | 2.800 | 2.800 |
| Rmerge | 0.188 | 0.602 |
| Rmeas | 0.201 | 0.637 |
| Rpim | 0.069 | 0.213 |
| Number of reflections | 18973 | 1836 |
| <I/σ(I)> | 14.71 | |
| Completeness [%] | 98.0 | 97.56 |
| Redundancy | 8.3 | 8.7 |
| CC(1/2) | 0.986 | 0.919 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 10% w/v PEG4000, 20% v/v glycerol, 0.03 M halogens, and 0.1 M bicine/Trizma base (pH 8.5) |






