213D
CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCIGGCCM5CGG) AT 1.6 ANGSTROMS SHOWING THE UNEXPECTED WOBBLE I.M5C BASE PAIR
Experimental procedure
Source type | ROTATING ANODE |
Source details | MACSCIENCE |
Temperature [K] | 290 |
Detector technology | DIFFRACTOMETER |
Detector | SIEMENS |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 25.020, 44.950, 47.620 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 8.000 - 1.600 |
R-factor | 0.163 |
Rwork | 0.163 |
RMSD bond length | 0.013 |
RMSD bond angle | 31.900 * |
Refinement software | X-PLOR |
Data quality characteristics
Overall | |
High resolution limit [Å] | 1.600 |
Rmerge | 0.021 * |
Total number of observations | 21000 * |
Number of reflections | 6143 |
Completeness [%] | 86.0 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | pH 7.00, VAPOR DIFFUSION, HANGING DROP |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | WATER | ||
2 | 1 | 1 | MPD | ||
3 | 1 | 1 | NA CACODYLATE | ||
4 | 1 | 1 | SPERMINE_HCL | ||
5 | 1 | 2 | WATER | ||
6 | 1 | 2 | MPD |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | DNA | 2 (mM) | |
2 | 1 | drop | sodium cacodylate | 40 (mM) | |
3 | 1 | drop | spermine tetrachloride | 5 (mM) | |
4 | 1 | reservoir | MPD | 50 (%(v/v)) |