Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YRR

Crystal Structure Of The N-Acetylglucosamine-6-Phosphate Deacetylase From Escherichia Coli K12 at 2.0 A Resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE D03B-MX1
Synchrotron siteLNLS
BeamlineD03B-MX1
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1999-01-28
DetectorMAR scanner 345 mm plate
Spacegroup nameP 21 21 2
Unit cell lengths82.157, 114.554, 80.208
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.000
R-factor0.161
Rwork0.159
R-free0.19900
Structure solution methodSIRAS
Starting model (for MR)EXPERIMENTAL PHASES FROM AN IODINE SOAKED CRYSTAL
RMSD bond length0.022
RMSD bond angle1.887
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHELXD
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.050
High resolution limit [Å]2.0002.000
Rmerge0.0600.220
Number of reflections50702
<I/σ(I)>14.14.27
Completeness [%]97.799.3
Redundancy3.43.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
14293sodium dihydrogenophosphate hydrate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 4.00
14293sodium dihydrogenophosphate hydrate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 4.00
14293sodium dihydrogenophosphate hydrate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 4.00

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon